Ideally, when you flip to a pie/donut chart for a matrix question, each pie/donut represents a "row" in the matrix, which is really a question on the survey. This is how the chart renders in a bar chart, which is correct:
However, when switching to a pie/donut (in order to see percentages of responses, which is important), the pies/donuts are organized by response type, not by question. Ideally each pie/donut below is a question vs a response type.